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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015827619.1_cds_XP_016503141.1_16712
CDS Infomation

[gene=LOC107821230] [db_xref=GeneID:107821230] [protein=putative G3BP-like protein] [protein_id=XP_016503141.1] [location=join(3284..3748,4955..5056,5168..5440,6087..6119,10426..10560,11783..12089,13248..13513,13617..13806,13930..14051,14136..14201,15590..15668,16642..16850)] [gbkey=CDS]
Sequence

ATGGCGGCCGCAGCTGCCACAGCAGTAGCTTCTTCATTCTCCAGTACTCTTCATTCTATA
CGTTCTAAAACATGGCCTAATTATAACTCTGATCATCTCCTCAAAGTTCCATCCACTAGA
ACACCAAATATTGCATTAATTTCATCAGCAGCAACAGCATCAGTTCATTTATTTGGAAGT
GAAGTGACATCAGTTGCTAAGAAGTGGAGGGTGGTGCCGAGGTTGGCGGCTGCGGTGGCG
CAAGAGGAGGCCGAGGCGGTGACGGTGGAGGAGGAAGAGGCCGAGGCGGTGGCGGTTGAA
GAGGAAGTGGTGGTGGAGGAAAAAGGAGGAGAGGGTTCTGAAGAGAGTAGTAGTGAAGGT
GAAGGTGTAAATACTAAGCTTTATTTTGGGAATTTGCCGTATCTTTGTGATAGTGCACAA
CTTGCTGGGATTGTTCAAGATTATGCTACTCCTGAGCTTGTTGAGGTTCTTTATGATAGG
GAAACAGGTAAAAGCAGAGGATTTGCATTTGTGACAATGAGTTCTCTTGAAGATTGCAAA
ACAGTAATCGAAAATCTAGACGGAAGAGAGTATGGTGGAAGAACCTTAAGGGTGAATTTC
TCAGACAAGCCTAAACCAAAAGAACCACTTTACCCAGAAACTGAACACAAACTCTTTGTT
GGTAATTTGGCCTGGTCAGTCACATCTGAAAGTTTGGTACAAGCATTTCAAGAATATGGA
ACTGTTGTTGGAGCTAGGGTACTATATGATGGTGAGACTGGGAGATCTCGTGGCTATGGT
TTTGTGAGCTATGAGAATAGAGAACAATTGGAGAATGCCCTTCAAAATCTTAATGGAGTG
GAACTGGATGGAAGGGCAATGCGCATTAGCTTAGTCGGGACGTACTTCGTGGGCCAGTAT
TATCAGATGTTACAGACCCAACCCGATTTTGTTCACCAGTTTTACAGTGATGCTAGTACC
GTGCTTCGAATTGATTCCAGCACCAGGGAGACTGCTTCAGGGATGCTGCAAATCCACACC
CTCGTCATGTCGCTCCATTATACTGGGATAGAGATTAAAACACTGCATTCCTTGGAATCA
TGGAATGGTGGTGTCCTAGTGATGGTTTCAGGTTCTGTCCACGTGAAAGGTATCAACAGG
AGTAGGAAGTTCGTACAAACATTTTTCCTTGCACCCCAGGAAAAGGGATACTTTGTCCTC
AATGATATCTTTCACTATGTTGATGAGGAACAAGTTCTTCAGCATCCGGTGCCCTATCTA
GGGCAGACTAGCCTCGATTCCAAGCTGAATGTCTCCACTACAATTCAAGAGCAAGTACCC
AACTACATGCTTGGTGGAGAAATCCAGGCAAGGGAGTTTGCTGCTCCTCCTAAAATTCAA
GATAATGGGCCTGTCAATAACTACAGTTTTCCGGACGAACGGCTACAACATGTCCCTGAA
GCCGAGAAGATCCTTGAAGATAATTTTGCAGCACAGTCAAACGGCTCATTACAAAGTACA
ATTAATGCAGTACAAGAACATTTATCCAGTCCTATTGAGGAACCAGTTGCAGAGCCCCAA
AAGCACACTTATGCTTCTATTTTACAGGTTACTAAAGGGCAGTCTGCACAAGGAGGACCA
GCCCAGTTTTCTTTCAACAAACCTACACCCCCTCCTTCAGAGTGGCAACATGTGCCAGAG
CCTCCTGCTCTGTCATCGGTTCCATTGACTAATGCTATTGAGAGGTCTATAACAGAGGCA
ACAGAAGAGGCTTCAGCTGTGGAAGATGAAGTTGAAGTCAAGTCTGTATATGTCAAAAAT
GTGCCTACAACGATGGCAGCTTATGAAATCGAGGAGGAATTCAAAAAGTTTGGTAAACTA
AAACCTGATGCTGTTGCCATTAGAACGCGAAAGGACATTGATGTGTGCTATGCATTTGTC
GAATTTGAAGATGTAACTGGTGTTCAGAATGCAATTGAGGCATCTACTGTTCAGATTGGT
GGACACCAGTTGTACATTGAAGGGAGGAGACCAAACAGAAACAACTTAATTCGAGGAAGA
GGAAGGGGTAGAGGCAGAGTTAGCTACTCCATGGACGGGAGGGGACGCTATGGCAGCCGT
GGGTTTGGCAGAGCTGGTCAAGATGGAGGTGACCGTGACTACGGAAGATCAAGAGGAAAT
GGTTACTATAGACAAGCTCCTCGGCAAGAAAGAGCTTACACTGGCAATCAGCAAAGCTTG
AGAAATGAGCAGTACTCATGGGAATAA

Peptide Sequence

PEP ID

XP_016503141.1
PEP Infomation

PREDICTED: putative G3BP-like protein [Nicotiana tabacum]
Sequence

MAAAAATAVASSFSSTLHSIRSKTWPNYNSDHLLKVPSTRTPNIALISSAATASVHLFGS
EVTSVAKKWRVVPRLAAAVAQEEAEAVTVEEEEAEAVAVEEEVVVEEKGGEGSEESSSEG
EGVNTKLYFGNLPYLCDSAQLAGIVQDYATPELVEVLYDRETGKSRGFAFVTMSSLEDCK
TVIENLDGREYGGRTLRVNFSDKPKPKEPLYPETEHKLFVGNLAWSVTSESLVQAFQEYG
TVVGARVLYDGETGRSRGYGFVSYENREQLENALQNLNGVELDGRAMRISLVGTYFVGQY
YQMLQTQPDFVHQFYSDASTVLRIDSSTRETASGMLQIHTLVMSLHYTGIEIKTLHSLES
WNGGVLVMVSGSVHVKGINRSRKFVQTFFLAPQEKGYFVLNDIFHYVDEEQVLQHPVPYL
GQTSLDSKLNVSTTIQEQVPNYMLGGEIQAREFAAPPKIQDNGPVNNYSFPDERLQHVPE
AEKILEDNFAAQSNGSLQSTINAVQEHLSSPIEEPVAEPQKHTYASILQVTKGQSAQGGP
AQFSFNKPTPPPSEWQHVPEPPALSSVPLTNAIERSITEATEEASAVEDEVEVKSVYVKN
VPTTMAAYEIEEEFKKFGKLKPDAVAIRTRKDIDVCYAFVEFEDVTGVQNAIEASTVQIG
GHQLYIEGRRPNRNNLIRGRGRGRGRVSYSMDGRGRYGSRGFGRAGQDGGDRDYGRSRGN
GYYRQAPRQERAYTGNQQSLRNEQYSWE

Transcript Sequence

Gene sequence data has not been registered.